Package: gProfileR 0.7.0
gProfileR: Interface to the 'g:Profiler' Toolkit
This package has been deprecated and will not be updated. New users should use the package 'gprofiler2' (<https://CRAN.R-project.org/package=gprofiler2>) for up-to-date data and improved functionality. Functional enrichment analysis, gene identifier conversion and mapping homologous genes across related organisms via the 'g:Profiler' toolkit (<https://biit.cs.ut.ee/gprofiler/>).
Authors:
gProfileR_0.7.0.tar.gz
gProfileR_0.7.0.zip(r-4.5)gProfileR_0.7.0.zip(r-4.4)gProfileR_0.7.0.zip(r-4.3)
gProfileR_0.7.0.tgz(r-4.4-any)gProfileR_0.7.0.tgz(r-4.3-any)
gProfileR_0.7.0.tar.gz(r-4.5-noble)gProfileR_0.7.0.tar.gz(r-4.4-noble)
gProfileR_0.7.0.tgz(r-4.4-emscripten)gProfileR_0.7.0.tgz(r-4.3-emscripten)
gProfileR.pdf |gProfileR.html✨
gProfileR/json (API)
| # Install 'gProfileR' in R: |
| install.packages('gProfileR', repos = c('https://korogenoest.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 5 years agofrom:83a6c73074. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 20 2024 |
| R-4.5-win | OK | Nov 20 2024 |
| R-4.5-linux | OK | Nov 20 2024 |
| R-4.4-win | OK | Nov 20 2024 |
| R-4.4-mac | OK | Nov 20 2024 |
| R-4.3-win | OK | Nov 20 2024 |
| R-4.3-mac | OK | Nov 20 2024 |
Exports:gconvertget_base_urlget_tls_versionget_user_agentgorthgprofilerset_base_urlset_tls_versionset_user_agent
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Convert gene IDs. | gconvert |
| Get the base URL. | get_base_url |
| Get the TLS version for SSL | get_tls_version |
| Get current user agent string. | get_user_agent |
| Find orthologs. | gorth |
| Annotate gene list functionally. | gprofiler |
| Set the base URL. | set_base_url |
| Set the TLS version to use for SSL | set_tls_version |
| Set custom user agent string. | set_user_agent |
